CDS

Accession Number TCMCG007C45848
gbkey CDS
Protein Id XP_009106054.1
Location join(26219552..26221172,26221258..26221405,26221478..26221625,26221693..26221911,26222005..26222244)
Gene LOC103831871
GeneID 103831871
Organism Brassica rapa

Protein

Length 791aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009107806.3
Definition uncharacterized protein LOC103831871 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category J
Description rRNA pseudouridine synthesis
KEGG_TC -
KEGG_Module M00425        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K02449        [VIEW IN KEGG]
ko:K11129        [VIEW IN KEGG]
ko:K11321        [VIEW IN KEGG]
EC 2.7.11.22        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000470        [VIEW IN EMBL-EBI]
GO:0000491        [VIEW IN EMBL-EBI]
GO:0000492        [VIEW IN EMBL-EBI]
GO:0000723        [VIEW IN EMBL-EBI]
GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005697        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006278        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007004        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010833        [VIEW IN EMBL-EBI]
GO:0015030        [VIEW IN EMBL-EBI]
GO:0015934        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016073        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0022625        [VIEW IN EMBL-EBI]
GO:0022626        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0031118        [VIEW IN EMBL-EBI]
GO:0031120        [VIEW IN EMBL-EBI]
GO:0031429        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032200        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034512        [VIEW IN EMBL-EBI]
GO:0034513        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0040031        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042273        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044391        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044445        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070034        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0072588        [VIEW IN EMBL-EBI]
GO:0072589        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090661        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAGAAACGCTAACAGTAACGTGTTTCTCGAAGAATGGTTGAGAGTTGTGAGTGGAAGCAGCGTCTCTAGTGGTTTAGTGAAGCAGGACTCTGCACCATCTGCTAGGTCTATTATTCAAGCATGGTCCGAGATTCGTGAGTCTCTTCAAAGCCAGAGGTTCGATACACGTTACCTTCAAGCTTTGAGAGCTTTGGTTAGCTCTGAGTCCACTATCCACGTCGCTGATCCCCAAGCAAAGCTTCTTATCGCTATACTATCTTTAAAAGATGTCTCTCTTCCGTATGAGTCTTGTACGCTTGTTATGAGATTACTCTATGTGTGGATTAGGAAAGCTTTTAGACCCTCTCAGGCTCTTGTTGGTTCGGCTGTTCAGGCTATTCGTGGCGTTGTTGTTGATGATGGTAGGAGTAATCTGCAGCCGGTGTTGTTAGCGCAGAGCGTTCTGGTGGCTGGTGCTTTTGCGAGTGTGCATTCTGTGTCGGGAGAGTTGAAAGTGTTGAGCTTGGAGTTGCTATGCAGGCTTTTGGAAGGAGAGGGATCACTGGTGGGATCTCGAGAAGAGCTTGTTCCTGTAGTGCTTGCGGGGATCGGGTATGGTTTATCCTCTTCGTCTGATGTTCATTACGTTAGGCTATTGGATTCCTTGTTTGGCTGCAGCATTTGGTTGAAAGATGGTAGTGTCACTCATGGGCTGATGATTCTTCATTTGGTCGAGTGGGTTGTGTCAGGTTACATGAGGTCTAACTATGTAAACAAGATGTCTCTCTTTGCAAACGAGGTACTAGAGACTTCTAAGGCAGACTACACTCCTTTTGCTGTCTTAATGGCAGCAGCGGGAGTACTCAGAGCTTCCGCGGCAGGATCACAGAATCTTGAGGTTGTTTCTAAACTTAGAAACTCAGCGGAAAAACGTTTAGACGCTGTAGCTCAACTTTTAGTTGCTAATGGTTCAATCACTCAGAGAGATGATCTTCTGTTGAAGTGCTTTGCTATAGCATTGGCTCGATGTGGGACTGTTTCTCCCTCTCCTCCTCTGCTTCTGTGCCTCGCTTCTGCATTGTTAACTCAGGTGTTTCCTCTGGGCAATATATATGAATCGTTTTGCAAAGATCCTATTGGACCAAGACTCATTTGGGTGAGGGAGCATCTTTCTGGTGTTCTCTTCAAGGAATCAGGGGCCATAACCGGAGCTTTCTGCAATCAATACGCAAAAGCAAATGAAGAGAACAAATACATTGTGGAGAATATGGTTTGGGACTTCTGTCAAAACCTCTACTTACAGCACCGTCAGATCGCTCTACTGCTTCGTGGTGTAGAAGATACATTGCTTGGAGACATAGAGAAGATCGCAGAATCATCTTTCCTCATGGTTGTGGTCTTTGCGCTAGCTGTCACAAAACAGTGGCTGAATCCAATAGTGTCTGAAGAAAGAAAGATGGAGACATCAGTCAAGATACTAGTTTCGTTCTCATGTGTAGAGTATTTTAGACATATTCGCTTACCTGAATACATGGAGACGATCAGAGAGGTGATCTCATGCGTCCAGGAGAATGATGCTACTTGTGTTTCATTTGTAGAGTCCATCCCTGCCTATGGTAGCTTGACGAATCCGAAAGACTTGTTTACGCAGAGGATAGAGTATGAATGGTCAAGAGATGATGTGCAGACATCTCGAATACTGTTTTATCTTCGAGTGATCCCAACGTGCATTGGAAGGTTATCTGCTTCTGCCTTCAGGAGAGTTGTTGCATCAACCATGTTTTTATATATTGGACATCCTAACAGGAAAGTGGCACGAGCATCTCATACTTTGTTTGTAGCATTCCTCTCTTCGGCAAAGGAGTCGGAAGAGGACGAAAGAAACCAACTCAAACAAGACCTTGTTTACTATTACATGGAAAGATCTTTGGAGGGTTATCCTGAGATCACACCATTTGAAGGTTTGGCTTCAGGCGTTGCAGCCTTGACCCGGCATCTACCTGCAGGAAGTCCTGCTATATTTTACTCTGTCCACAGCCTTGTCGAGAAGGCTTCAACGTTTAAAACCGATGCGTTGCAAGGAAGTAAGTCTGATCCTGGTAATCAGATTCTTGACTTGCTTCTGAGACTCGTCTCTTTGGTTGATATACAAGTGTTGCCGTATCTGATGAAGTCATTAGCACAGCTTATTATAGTGTTACCAAAAGAAAAGCAGAACATGGTGCTTGGTGAACTGTATGGTCAAGTGGCTGAATCAGACGATGTGATTCGCAAGCCTTCTTTAGTCTCTTGGCTACAGTCACTGAACTACTTGTGTTCTAATAACCGGACTCAAGGCTCAGGTTCTGGACCAACTATAGACACTTCGAACCAGTTGGCTGCTCGGCTCTAG
Protein:  
MARNANSNVFLEEWLRVVSGSSVSSGLVKQDSAPSARSIIQAWSEIRESLQSQRFDTRYLQALRALVSSESTIHVADPQAKLLIAILSLKDVSLPYESCTLVMRLLYVWIRKAFRPSQALVGSAVQAIRGVVVDDGRSNLQPVLLAQSVLVAGAFASVHSVSGELKVLSLELLCRLLEGEGSLVGSREELVPVVLAGIGYGLSSSSDVHYVRLLDSLFGCSIWLKDGSVTHGLMILHLVEWVVSGYMRSNYVNKMSLFANEVLETSKADYTPFAVLMAAAGVLRASAAGSQNLEVVSKLRNSAEKRLDAVAQLLVANGSITQRDDLLLKCFAIALARCGTVSPSPPLLLCLASALLTQVFPLGNIYESFCKDPIGPRLIWVREHLSGVLFKESGAITGAFCNQYAKANEENKYIVENMVWDFCQNLYLQHRQIALLLRGVEDTLLGDIEKIAESSFLMVVVFALAVTKQWLNPIVSEERKMETSVKILVSFSCVEYFRHIRLPEYMETIREVISCVQENDATCVSFVESIPAYGSLTNPKDLFTQRIEYEWSRDDVQTSRILFYLRVIPTCIGRLSASAFRRVVASTMFLYIGHPNRKVARASHTLFVAFLSSAKESEEDERNQLKQDLVYYYMERSLEGYPEITPFEGLASGVAALTRHLPAGSPAIFYSVHSLVEKASTFKTDALQGSKSDPGNQILDLLLRLVSLVDIQVLPYLMKSLAQLIIVLPKEKQNMVLGELYGQVAESDDVIRKPSLVSWLQSLNYLCSNNRTQGSGSGPTIDTSNQLAARL